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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130637140_130661947_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130637140 - 130661947

Intron Length:

24808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAGGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTGGTTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

AGGTGTATATTT

Flanking Amino Acid:

ILRREMFVFKDQWFWRVRNN

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

64.1

0.35

1.2

45.5

Major PPT

79.4

0.66

69.7

45.4

Minor 5ss

30.8

-2.2

3.7

47.1

48.3

Minor BPS

41.1

-0.6

55.43

41.3

Associated Gene:

Gene:

MMP16

Ensembl Gene ID:

ENSAPLG00000015440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016086

130619209 - 130798617

179409

ENSAPLT00000040108

130619209 - 130799527

180319

ENSAPLT00000018795

130627345 - 130799527

172183