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Intron Name: Anas_platyrhynchos_platyrhynchos_2_130669266_130690668_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

130669266 - 130690668

Intron Length:

21403

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

TGTTTCATACAT

Flanking Amino Acid:

PWTLGNPNHDGNDLFLVAVH

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.1

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

84.9

0.79

0.7

80.1

25.5

Minor 5ss

29.9

-2.3

3.3

42.5

Minor BPS

49.7

0.06

74.72

41.6

Associated Gene:

Gene:

MMP16

Ensembl Gene ID:

ENSAPLG00000015440

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016086

130619209 - 130798617

179409

ENSAPLT00000040108

130619209 - 130799527

180319

ENSAPLT00000018795

130627345 - 130799527

172183