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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1310178_1311398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1310178 - 1311398

Intron Length:

1221

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTCTAT

U12 Branch Point Sequence:

TCCTGCTCTATT

Flanking Amino Acid:

YYFMALKNDEIIDATQKGNC

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

72.2

39.5

Major BPS

47.4

-0.1

1.5

46.4

46.5

Major PPT

86.1

0.81

0.6

84.9

22.6

Minor 5ss

32.6

-2

3.4

46.8

48.5

Minor BPS

45.1

-0.3

2.2

63.58

46.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004917

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005096

1303326 - 1324123

20798