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Intron Name: Anas_platyrhynchos_platyrhynchos_2_131173952_131174805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

131173952 - 131174805

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TGGCTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

GTTTTTGTAAAT

Flanking Amino Acid:

KEKEEEEEEEEEDGTGGDQD

Intron Amino Acid Position:

543

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.3

0.8

84.2

27.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

72.8

0.51

65.5

Minor 5ss

40.6

-1.1

3.1

57.4

46.8

Minor BPS

53.8

0.2

2.1

77.19

39.4

Associated Gene:

Gene:

RAD21

Ensembl Gene ID:

ENSAPLG00000009130

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009534

131162139 - 131178069

15931