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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_131211488_131211845_R

Intron Information:

Intron Rank:
134615
Intron Class:
major
Intron Phase:
Intron Coordinates:
131211488 - 131211845
Intron Length:
358

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTTTGGGAA
5'SS Class:
major
3'SS Sequence:
TTCTTTTCCACAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTACAC
U12 Branch Point Sequence:
CTCTCTTCACCT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
69.6
0.46
1.2
63.1
36.8
Major BPS
72.8
0.57
1
81
30.3
Major PPT
87.3
0.84
0.6
83.5
24.9
Minor 5ss
31
-2.2
3.3
37.9
47.1
Minor BPS
52.7
0.16
1.9
71.32
46.1

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000019741
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000029776
131210352 - 131212376
2025