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Intron Name: Anas_platyrhynchos_platyrhynchos_2_131675188_131730825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

131675188 - 131730825

Intron Length:

55638

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAAAAA

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAG

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

70.2

35.7

Major BPS

55.9

0.15

1.5

55.4

41.7

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

30.7

-2.2

3.2

39.2

46.2

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

TRPS1

Ensembl Gene ID:

ENSAPLG00000009857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035558

131675110 - 131900671

225562