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Intron Name: Anas_platyrhynchos_platyrhynchos_2_131693518_131730825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

131693518 - 131730825

Intron Length:

37308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAG

U12 Branch Point Sequence:

TTTTTTTTGTTT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

55.9

0.15

1.5

55.4

41.7

Major PPT

92.6

0.96

0.7

88.3

28.9

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

46.8

-0.1

3.4

81.5

34.7

Associated Gene:

Gene:

TRPS1

Ensembl Gene ID:

ENSAPLG00000009857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025265

131692872 - 131900671

207800