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Intron Name: Anas_platyrhynchos_platyrhynchos_2_131895024_131899609_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

131895024 - 131899609

Intron Length:

4586

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGAAGA

5'SS Class:

major

3'SS Sequence:

GTGTTCCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTCATTATGT

Flanking Amino Acid:

ACGLYQKLHSTPRPLNIIKQ

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

1.1

43.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

72.9

0.52

66.8

39.6

Minor 5ss

31.9

-2.1

3.2

40.3

45.6

Minor BPS

53.1

0.18

2.2

78.05

43.9

Associated Gene:

Gene:

TRPS1

Ensembl Gene ID:

ENSAPLG00000009857

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022011

131666343 - 131900671

234329

ENSAPLT00000040704

131693970 - 131900671

206702

ENSAPLT00000010263

131666343 - 131900671

234329

ENSAPLT00000040036

131730826 - 131903809

172984

ENSAPLT00000035558

131675110 - 131900671

225562

ENSAPLT00000025265

131692872 - 131900671

207800

ENSAPLT00000041060

131715390 - 131900671

185282