Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_132086830_132114776_F

Intron Information:

Intron Rank:

149628

Intron Class:

major

Intron Phase:

Intron Coordinates:

132086830 - 132114776

Intron Length:

27947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTATGGAAA

5'SS Class:

major

3'SS Sequence:

TTTTAATTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

67.5

39.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.3

0.61

73.3

40.8

Minor 5ss

37.2

-1.4

39.3

46.4

Minor BPS

0.96

86.64

33.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037373

132086092 - 132114924

28833