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Intron Name: Anas_platyrhynchos_platyrhynchos_2_132797239_132827394_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

132797239 - 132827394

Intron Length:

30156

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATAA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTCACA

Flanking Amino Acid:

SWDFPVPICRAEDACGGTMR

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.99

0.8

23.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.4

0.84

0.7

83.5

31.6

Minor 5ss

37.3

-1.4

46.9

48.4

Minor BPS

62.5

0.39

1.7

74.03

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016217

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016914

132643335 - 132861662

218328