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Intron Name: Anas_platyrhynchos_platyrhynchos_2_132934419_132938924_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

132934419 - 132938924

Intron Length:

4506

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCCACAAAA

5'SS Class:

weak_major

3'SS Sequence:

AAATTAGAATAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATTAGAA

U12 Branch Point Sequence:

ATATACTGCACA

Flanking Amino Acid:

LTLWLYFKNKCSLSLDSTSL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

53.3

43.4

Major BPS

61.2

0.28

58.8

38.1

Major PPT

46.6

-0.1

1.2

44.5

44.3

Minor 5ss

25.8

-2.8

3.8

36.3

40.6

Minor BPS

48.2

-0.1

2.1

65.05

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020679

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020218

132934319 - 132998307

63989