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Intron Name: Anas_platyrhynchos_platyrhynchos_2_133015840_133018783_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

133015840 - 133018783

Intron Length:

2944

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTTGGCT

5'SS Class:

weak_major

3'SS Sequence:

TCCTCAATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTTTCCTCAATT

Flanking Amino Acid:

PGHSIKITFERFQTELNYDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.9

0.16

1.3

55.9

41.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

75.8

0.58

0.9

66.4

38.5

Minor 5ss

33.4

-1.9

3.5

48.6

47.1

Minor BPS

76.6

0.91

1.4

89.4

34.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017297

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025018

133004767 - 133032908

28142

ENSAPLT00000021307

133011093 - 133030718

19626