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Intron Name: Anas_platyrhynchos_platyrhynchos_2_133056436_133075926_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

133056436 - 133075926

Intron Length:

19491

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TCT|GCCAGAACA

5'SS Class:

weak_major

3'SS Sequence:

TTACAGCCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

ATGACAATAAAA

Flanking Amino Acid:

VQAGKGINISFLAFDTEASH

Intron Amino Acid Position:

206

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.5

58.4

39.9

Major BPS

71.6

0.54

33.1

Major PPT

71.4

0.48

66.6

40.1

Minor 5ss

21.8

-3.3

3.6

34.8

40.4

Minor BPS

45.8

-0.3

1.9

58.7

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020799

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027724

133035673 - 133105925

70253