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Intron Name: Anas_platyrhynchos_platyrhynchos_2_133183857_133190819_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

133183857 - 133190819

Intron Length:

6963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CAATGTTTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGTTTTTTATTT

Flanking Amino Acid:

TWTIKLPIGFGVHLQFVNFS

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

0.9

74.1

34.7

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.7

0.6

0.9

41.6

Minor 5ss

43.5

-0.7

3.1

57.4

41.8

Minor BPS

64.6

0.54

1.5

79.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029680

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037493

133175799 - 133212863

37065