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Intron Name: Anas_platyrhynchos_platyrhynchos_2_133937503_133942642_R

Intron Information:

Intron Rank:

150210

Intron Class:

major

Intron Phase:

Intron Coordinates:

133937503 - 133942642

Intron Length:

5140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTATTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTTCTTTATTG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

83.9

0.84

73.9

41.3

Major PPT

85.1

0.79

0.7

81.7

28.7

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

69.3

0.47

1.6

74.81

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028390

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042246

133937339 - 133944407

7069