Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_134162763_134167101_F

Intron Information:

Intron Rank:

143363

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

134162763 - 134167101

Intron Length:

4339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGAAGT

5'SS Class:

major

3'SS Sequence:

TACTCACCAAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

TTCTACTCACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.46

1.3

68.1

42.8

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

54.3

0.1

1.1

54.3

34.3

Minor 5ss

36.7

-1.5

2.9

45.9

Minor BPS

50.4

0.01

68.54

43.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027234

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021483

134162623 - 134171685

9063