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Intron Name: Anas_platyrhynchos_platyrhynchos_2_134365279_134367058_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
134365279 - 134367058

Intron Length:
1780

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGAGCTGT

5'SS Class:
major

3'SS Sequence:
CATTCCTGGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTAAA

U12 Branch Point Sequence:
TTGGTATTAAAA

Flanking Amino Acid:
ELSIDSCCRDRYFRRKELSE

Intron Amino Acid Position:
161

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1
66.1
42.1

Major BPS
82.6
0.81
0.8
82.2
24.5

Major PPT
65
0.34
1.1
61.5
39.6

Minor 5ss
40.6
-1
3.1
56.3
47.9

Minor BPS
51.6
0.05
1.8
65.19
41.1

Associated Gene:

Gene:
KCNV1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

134364766 - 134374121
9356

134364766 - 134374121
9356