Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_134367586_134373271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134367586 - 134373271

Intron Length:

5686

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTCA

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAC

U12 Branch Point Sequence:

CATGAATCAACC

Flanking Amino Acid:

RMLKLGRHSTGLRSLGMTIA

Intron Amino Acid Position:

337

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

70.7

35.9

Major BPS

73.6

0.59

0.9

63.3

35.6

Major PPT

87.1

0.84

0.7

84.6

30.3

Minor 5ss

39.5

-1.2

2.9

51.3

45.1

Minor BPS

-0.4

54.23

Associated Gene:

Gene:

KCNV1

Ensembl Gene ID:

ENSAPLG00000002909

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029617

134364766 - 134374121

9356

ENSAPLT00000002937

134364766 - 134374121

9356