Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_134466055_134493279_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134466055 - 134493279

Intron Length:

27225

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TCGCCCATGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCCCAT

U12 Branch Point Sequence:

TCTCGCCCATGC

Flanking Amino Acid:

FCYLISSSQKVPVPGCAVTE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.7

91.8

25.6

Major BPS

47.9

-0.1

1.3

55.8

41.7

Major PPT

62.3

0.28

54.6

40.1

Minor 5ss

29.8

-2.3

4.1

49.5

46.7

Minor BPS

33.6

-1.2

2.3

44.45

43.4

Associated Gene:

Gene:

SYBU

Ensembl Gene ID:

ENSAPLG00000002942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020593

134465351 - 134533412

68062