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Intron Name: Anas_platyrhynchos_platyrhynchos_2_134493804_134506299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134493804 - 134506299

Intron Length:

12496

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCGGGG

5'SS Class:

major

3'SS Sequence:

CTTTTCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAAAT

U12 Branch Point Sequence:

TTGTTAGAAATT

Flanking Amino Acid:

RTVSSNSFCSDDTGCPSSQS

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.7

0.32

1.3

49.8

46.9

Major BPS

59.4

0.23

1.2

65.3

38.6

Major PPT

86.3

0.82

0.6

85.5

21.9

Minor 5ss

33.1

-1.9

3.7

46.9

48.5

Minor BPS

43.8

-0.3

2.4

67.84

43.8

Associated Gene:

Gene:

SYBU

Ensembl Gene ID:

ENSAPLG00000002942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044876

134478925 - 134533626

54702

ENSAPLT00000020593

134465351 - 134533412

68062