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Intron Name: Anas_platyrhynchos_platyrhynchos_2_134506498_134527715_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134506498 - 134527715

Intron Length:

21218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTATA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

ATATCTTTACTC

Flanking Amino Acid:

KETKTNLVKPGSEADFSSSS

Intron Amino Acid Position:

159

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

84.9

26.2

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

92.2

0.95

0.6

84.9

29.9

Minor 5ss

-1.8

2.8

39.2

40.5

Minor BPS

62.4

0.37

1.6

69.19

36.7

Associated Gene:

Gene:

SYBU

Ensembl Gene ID:

ENSAPLG00000002942

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020593

134465351 - 134533412

68062

ENSAPLT00000002983

134504773 - 134533412

28640

ENSAPLT00000044876

134478925 - 134533626

54702