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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_134569653_134570881_R

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
134569653 - 134570881
Intron Length:
1229

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAAGAAAA
5'SS Class:
strong_major
3'SS Sequence:
TTATGTATTTCAG|C
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TCTTTTTCATTT
Flanking Amino Acid:
LVAEITPKGRALVPDSVKKE
Intron Amino Acid Position:
72

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
92.9
1.01
0.7
86
23.7
Major BPS
100
1.24
0.5
100
0
Major PPT
81.1
0.7
0.9
78.2
39.7
Minor 5ss
32.8
-2
2.9
39.7
45.8
Minor BPS
50.8
0.1
1.8
70.88
41.3

Associated Gene:

Gene:
ENY2
Ensembl Gene ID:
ENSAPLG00000004824
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000004962
134569383 - 134575381
5999
ENSAPLT00000036860
134569383 - 134575381
5999