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Intron Name: Anas_platyrhynchos_platyrhynchos_2_134596539_134600668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134596539 - 134600668

Intron Length:

4130

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCAATTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTCTGTACGT

Flanking Amino Acid:

DDAKTANEKKDPLYYWQQTE

Intron Amino Acid Position:

277

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.4

0.68

0.8

75.4

33.1

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

48.6

-0

2.5

78.9

Associated Gene:

Gene:

NUDCD1

Ensembl Gene ID:

ENSAPLG00000004835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004986

134575476 - 134609908

34433