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Intron Name: Anas_platyrhynchos_platyrhynchos_2_134606816_134609199_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

134606816 - 134609199

Intron Length:

2384

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGGGCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

TTCTTCCTATGT

Flanking Amino Acid:

WEHIATFNALGYVQASKQDK

Intron Amino Acid Position:

486

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

80.7

33.7

Major BPS

62.6

0.31

59.1

37.6

Major PPT

68.2

0.41

1.1

61.7

44.4

Minor 5ss

33.7

-1.9

3.3

47.7

Minor BPS

47.5

-0.1

2.2

71.67

45.4

Associated Gene:

Gene:

NUDCD1

Ensembl Gene ID:

ENSAPLG00000004835

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004986

134575476 - 134609908

34433