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Intron Name: Anas_platyrhynchos_platyrhynchos_2_135660761_135661416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135660761 - 135661416

Intron Length:

656

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTGTTTTTATTT

Flanking Amino Acid:

LLVIKDSDGQEAWAHITSYH

Intron Amino Acid Position:

764

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

75.1

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

94.3

0.6

93.1

23.6

Minor 5ss

32.4

-2

3.2

42.3

44.8

Minor BPS

56.7

0.29

1.6

70.24

42.1

Associated Gene:

Gene:

OXR1

Ensembl Gene ID:

ENSAPLG00000014816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027900

135473467 - 135729554

256088