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Intron Name: Anas_platyrhynchos_platyrhynchos_2_135665789_135685613_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135665789 - 135685613

Intron Length:

19825

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAAG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCATATTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAATTAT

U12 Branch Point Sequence:

GTCTCCATATTC

Flanking Amino Acid:

TTEDAAKEWEVVSVAEYHRR

Intron Amino Acid Position:

677

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.1

0.94

0.8

78.6

37.2

Major BPS

59.2

0.23

1.3

43.5

Major PPT

76.6

0.6

0.9

34.6

Minor 5ss

31.6

-2.1

3.1

38.7

46.6

Minor BPS

50.9

0.01

1.9

63.94

41.8

Associated Gene:

Gene:

OXR1

Ensembl Gene ID:

ENSAPLG00000014816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015460

135651691 - 135795398

143708

ENSAPLT00000040436

135654487 - 135722209

67723

ENSAPLT00000046883

135654487 - 135885217

230731

ENSAPLT00000027900

135473467 - 135729554

256088

ENSAPLT00000045628

135602517 - 135885217

282701

ENSAPLT00000019761

135653580 - 135729554

75975

ENSAPLT00000044413

135654487 - 135869729

215243

ENSAPLT00000018124

135653580 - 135729685

76106

ENSAPLT00000041511

135653580 - 135795398

141819