Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135696558 - 135703139

Intron Length:

6582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTTAAC

5'SS Class:

major

3'SS Sequence:

CCTCTCATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATAAA

U12 Branch Point Sequence:

TTTCCTCTCATT

Flanking Amino Acid:

INCKYITNGKGTVNGVLLVT

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

74.4

35.9

Major BPS

69.8

0.49

70.3

31.8

Major PPT

76.3

0.59

0.8

73.8

29.6

Minor 5ss

-1.7

2.9

45.5

42.6

Minor BPS

50.4

0.09

77.83

38.9

Associated Gene:

Gene:

OXR1

Ensembl Gene ID:

ENSAPLG00000014816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019761

135653580 - 135729554

75975

ENSAPLT00000041511

135653580 - 135795398

141819

ENSAPLT00000018124

135653580 - 135729685

76106

ENSAPLT00000040436

135654487 - 135722209

67723

ENSAPLT00000046883

135654487 - 135885217

230731

ENSAPLT00000015460

135651691 - 135795398

143708

ENSAPLT00000033448

135653580 - 135729685

76106

ENSAPLT00000045628

135602517 - 135885217

282701

ENSAPLT00000027900

135473467 - 135729554

256088

ENSAPLT00000044413

135654487 - 135869729

215243

Intron Name: Anas_platyrhynchos_platyrhynchos_2_135696558_135703139_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: