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Intron Name: Anas_platyrhynchos_platyrhynchos_2_135709245_135729397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135709245 - 135729397

Intron Length:

20153

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

CCAATTGATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTGAT

U12 Branch Point Sequence:

TTCCCCCCAATT

Flanking Amino Acid:

LRTPPRSRRQVESRDTLNSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

79.8

0.74

0.9

69.4

37.7

Major PPT

0.31

1.1

56.9

42.3

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

52.4

0.15

1.9

74.68

42.1

Associated Gene:

Gene:

OXR1

Ensembl Gene ID:

ENSAPLG00000014816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033448

135653580 - 135729685

76106

ENSAPLT00000018124

135653580 - 135729685

76106