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Intron Name: Anas_platyrhynchos_platyrhynchos_2_135716730_135729397_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

135716730 - 135729397

Intron Length:

12668

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCGGGG

5'SS Class:

major

3'SS Sequence:

CAATTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAC

U12 Branch Point Sequence:

GTTGCCTCAATT

Flanking Amino Acid:

APHPASEPPPDTGQKKTPDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.3

43.3

Major BPS

80.9

0.77

0.8

81.7

25.4

Major PPT

0.74

0.8

80.7

36.3

Minor 5ss

32.8

-2

3.8

46.4

Minor BPS

0.58

1.7

81.06

40.8

Associated Gene:

Gene:

OXR1

Ensembl Gene ID:

ENSAPLG00000014816

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019761

135653580 - 135729554

75975

ENSAPLT00000027900

135473467 - 135729554

256088