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Intron Name: Anas_platyrhynchos_platyrhynchos_2_136251634_136324392_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
136251634 - 136324392

Intron Length:
72759

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGAAAA

5'SS Class:
strong_major

3'SS Sequence:
TCTTTGTTCGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CTCTAAG

U12 Branch Point Sequence:
AGTGCTCTAAGC

Flanking Amino Acid:
AAEAEDWDGPGELEVVQKDG

Intron Amino Acid Position:
101

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
1
76.9
33.7

Major BPS
58.2
0.2
1.5
67.3
37.8

Major PPT
84.4
0.77
0.8
79.9
32.1

Minor 5ss
31.4
-2.1
3.1
39.2
46.2

Minor BPS
46.5
-0.2
2
57.85
41

Associated Gene:

Gene:
ZFPM2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

136091344 - 136327111
235768

136091344 - 136408264
316921

136091344 - 136330469
239126

136091344 - 136408264
316921