Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_136324495_136327104_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

136324495 - 136327104

Intron Length:

2610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTTAAGCCA

5'SS Class:

weak_major

3'SS Sequence:

TTGTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

ACTTCTTGGATT

Flanking Amino Acid:

MKSNEEGIQGVA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.1

0.14

1.2

51.4

39.3

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

92.9

0.97

0.7

92.3

26.6

Minor 5ss

28.5

-2.5

3.1

32.5

35.5

Minor BPS

59.9

0.39

1.4

73.39

Associated Gene:

Gene:

ZFPM2

Ensembl Gene ID:

ENSAPLG00000015698

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036015

136091344 - 136327111

235768