Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_136595072_136595508_F

Intron Information:

Intron Rank:

126746

Intron Class:

major

Intron Phase:

Intron Coordinates:

136595072 - 136595508

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTATGTCTT

5'SS Class:

major

3'SS Sequence:

GTATCTCCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTTAT

U12 Branch Point Sequence:

ATGTGATTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

77.2

37.7

Major BPS

72.5

0.56

1.2

63.4

Major PPT

68.6

0.42

63.1

38.2

Minor 5ss

-0.2

2.8

67.6

37.2

Minor BPS

59.6

0.38

79.61

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041597

136595050 - 136601855

6806