Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_136744797_136754338_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136744797 - 136754338

Intron Length:

9542

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTATG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTAAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TTTTTGTAAACA

Flanking Amino Acid:

DIVIWDPKATRTISAKTHHQ

Intron Amino Acid Position:

437

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

35.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

69.3

0.44

63.2

41.2

Minor 5ss

45.4

-0.5

2.5

59.2

45.4

Minor BPS

57.1

0.22

2.3

78.35

38.8

Associated Gene:

Gene:

DPYS

Ensembl Gene ID:

ENSAPLG00000001792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001898

136723955 - 136758920

34966