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Intron Name: Anas_platyrhynchos_platyrhynchos_2_136823430_136836398_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

136823430 - 136836398

Intron Length:

12969

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGGCAC

U12 Branch Point Sequence:

TTTGTCTCCACA

Flanking Amino Acid:

PCMNSLEEDGEAGGKKLRST

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

46.5

-0.2

1.4

54.8

42.1

Major PPT

0.72

0.8

76.7

32.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

50.3

2.1

70.77

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029961

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028720

136819685 - 136836525

16841