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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1369475_1370630_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1369475 - 1370630

Intron Length:
1156

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCTGCG

5'SS Class:
major

3'SS Sequence:
TCTCTTTGGGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
AAATAAA

U12 Branch Point Sequence:
CTTCCCCCACCT

Flanking Amino Acid:
DELNVKSEEQVFEAALAWIR

Intron Amino Acid Position:
203

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.8
0.49
1.2
60.8
44.2

Major BPS
62
0.3
1
62.3
30.4

Major PPT
73.7
0.53
1
72.2
37.8

Minor 5ss
37.5
-1.4
3.3
50.5
46

Minor BPS
46.5
-0.1
2.1
70.61
45.8

Associated Gene:

Gene:
KLHL18

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1367176 - 1377142
9967

1364748 - 1376142
11395