Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_137023828_137024968_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137023828 - 137024968

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGAAAA

5'SS Class:

major

3'SS Sequence:

ATTTGAATCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTATTTATAATT

Flanking Amino Acid:

QLESSKFQLWENGPTFYFCD

Intron Amino Acid Position:

322

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

67.8

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.8

0.49

67.7

Minor 5ss

-2.2

3.1

31.2

42.7

Minor BPS

64.3

0.53

1.5

81.08

34.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026265

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022675

137023730 - 137076268

52539