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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1371180_1372009_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1371180 - 1372009

Intron Length:
830

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCTTGC

5'SS Class:
major

3'SS Sequence:
TTAATTTGAGTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
CCCCTTTTAATT

Flanking Amino Acid:
IYAVGGLNSAANFYAGDSLN

Intron Amino Acid Position:
302

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.7
0.51
1.2
64.3
43.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
65.3
0.34
1.1
63.3
42.6

Minor 5ss
45
-0.5
2.9
62.1
42.5

Minor BPS
57.2
0.3
1.3
63.63
42

Associated Gene:

Gene:
KLHL18

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

1364748 - 1376142
11395