Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_137316268_137317572_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137316268 - 137317572

Intron Length:

1305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CCATTTTTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

CCATTTTTAACA

Flanking Amino Acid:

TVLSGACDGEVRIWNLTKRQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

73.8

0.59

0.9

26.8

Major PPT

76.4

0.59

0.9

72.6

36.2

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

67.3

0.54

1.3

66.93

40.2

Associated Gene:

Gene:

DCAF13

Ensembl Gene ID:

ENSAPLG00000002811

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040938

137295350 - 137317929

22580

ENSAPLT00000002864

137295350 - 137319277

23928