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Intron Name: Anas_platyrhynchos_platyrhynchos_2_137337819_137340100_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

137337819 - 137340100

Intron Length:

2282

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCGGCCGAG

5'SS Class:

weak_major

3'SS Sequence:

CTCTGTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

GTGTCAGCAAGC

Flanking Amino Acid:

KQKALRQREVYNGMCLQGPS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.3

41.9

42.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

83.2

0.75

0.8

80.3

31.8

Minor 5ss

24.2

-3

4.3

33.1

44.8

Minor BPS

39.4

-0.8

2.4

52.45

44.6

Associated Gene:

Gene:

CTHRC1

Ensembl Gene ID:

ENSAPLG00000003081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003119

137335757 - 137340334

4578