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Intron Name: Anas_platyrhynchos_platyrhynchos_2_137439225_137440224_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137439225 - 137440224

Intron Length:

1000

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

ACTTTACTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAA

U12 Branch Point Sequence:

CAAACTTTACTT

Flanking Amino Acid:

LDSSAAAIIDATMDIPGLNL

Intron Amino Acid Position:

352

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

92.9

22.2

Major BPS

62.7

0.32

1.2

33.2

Major PPT

80.9

0.69

0.8

74.3

34.8

Minor 5ss

44.1

-0.6

2.9

65.1

39.1

Minor BPS

49.7

0.06

1.6

62.24

42.2

Associated Gene:

Gene:

ATP6V1C1

Ensembl Gene ID:

ENSAPLG00000003354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021104

137439129 - 137455106

15978

ENSAPLT00000003472

137438232 - 137451214

12983

ENSAPLT00000024743

137437432 - 137456286

18855

ENSAPLT00000023847

137436943 - 137451214

14272