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Intron Name: Anas_platyrhynchos_platyrhynchos_2_137451215_137455021_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

137451215 - 137455021

Intron Length:

3807

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTGTG

5'SS Class:

major

3'SS Sequence:

TTTCTGCTACTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

TTTTCTTCCATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

70.7

39.5

Major BPS

0.37

1.3

76.1

Major PPT

73.3

0.52

0.9

67.2

39.1

Minor 5ss

42.5

-0.8

3.1

57.9

46.8

Minor BPS

56.6

0.19

1.9

74.09

37.4

Associated Gene:

Gene:

ATP6V1C1

Ensembl Gene ID:

ENSAPLG00000003354

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021104

137439129 - 137455106

15978