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Intron Name: Anas_platyrhynchos_platyrhynchos_2_137597178_137598583_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137597178 - 137598583

Intron Length:

1406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TTTCTGCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

CTTTTATTAAAA

Flanking Amino Acid:

EDVKNVPVGKVLKVDGAYVA

Intron Amino Acid Position:

646

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

80.9

32.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

82.3

0.73

0.8

77.5

31.3

Minor 5ss

41.8

-0.9

2.5

51.7

44.8

Minor BPS

0.37

1.7

73.41

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036567

137582165 - 137620279

38115

ENSAPLT00000034836

137581533 - 137620279

38747

ENSAPLT00000004415

137523057 - 137620279

97223

ENSAPLT00000045921

137523057 - 137620279

97223

ENSAPLT00000039266

137523057 - 137620279

97223