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Intron Name: Anas_platyrhynchos_platyrhynchos_2_137600313_137601409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137600313 - 137601409

Intron Length:

1097

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGAGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTAACTTAATT

Flanking Amino Acid:

KAAIIIMAVEKQTLMQHILR

Intron Amino Acid Position:

849

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

80.9

31.4

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

75.1

0.57

69.8

40.3

Minor 5ss

36.4

-1.5

3.6

56.3

47.9

Minor BPS

75.3

0.87

1.4

90.07

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004191

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034836

137581533 - 137620279

38747

ENSAPLT00000004415

137523057 - 137620279

97223

ENSAPLT00000045921

137523057 - 137620279

97223

ENSAPLT00000039266

137523057 - 137620279

97223

ENSAPLT00000036567

137582165 - 137620279

38115