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Intron Name: Anas_platyrhynchos_platyrhynchos_2_137831140_137836109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137831140 - 137836109

Intron Length:

4970

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTAAT

U12 Branch Point Sequence:

TTTTTTCCATCA

Flanking Amino Acid:

YCQIKVFCDKGAERKIRDEE

Intron Amino Acid Position:

491

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.8

1.06

0.7

81.5

32.7

Major BPS

61.6

0.29

1.3

63.6

42.5

Major PPT

86.2

0.81

0.8

86.8

25.8

Minor 5ss

32.1

-2

3.1

40.8

45.4

Minor BPS

-0.2

67.68

Associated Gene:

Gene:

GRHL2

Ensembl Gene ID:

ENSAPLG00000002882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002930

137817888 - 137878406

60519