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Intron Name: Anas_platyrhynchos_platyrhynchos_2_137859662_137877894_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

137859662 - 137877894

Intron Length:

18233

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCATAAT

U12 Branch Point Sequence:

CAGTCCATAATG

Flanking Amino Acid:

IGSNMSQETDKNCLNTTEAQ

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

26.3

Major BPS

62.9

0.32

1.2

63.9

38.4

Major PPT

84.7

0.78

0.8

77.2

37.1

Minor 5ss

36.1

-1.6

3.3

49.4

41.3

Minor BPS

55.5

0.03

1.7

57.32

44.4

Associated Gene:

Gene:

GRHL2

Ensembl Gene ID:

ENSAPLG00000002882

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002930

137817888 - 137878406

60519