Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_138000154_138001727_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138000154 - 138001727

Intron Length:

1574

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGG

5'SS Class:

major

3'SS Sequence:

TTTTCCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAT

U12 Branch Point Sequence:

GGTGTCTGAATA

Flanking Amino Acid:

APTHRRRLPQKHISMDKNEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.2

58.7

46.2

Major BPS

62.3

0.31

1.3

64.3

39.7

Major PPT

86.8

0.83

0.6

85.9

Minor 5ss

34.2

-1.8

3.6

46.8

48.5

Minor BPS

53.4

0.1

1.5

61.32

38.9

Associated Gene:

Gene:

YWHAZ

Ensembl Gene ID:

ENSAPLG00000002635

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039630

137999980 - 138021798

21819

ENSAPLT00000002676

137999980 - 138024339

24360