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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138054790_138055628_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138054790 - 138055628

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

CTGTTCATAAGC

Flanking Amino Acid:

VPRVMSTQRVANTSTQTMGP

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

84.8

0.86

85.7

34.9

Major PPT

84.2

0.77

0.8

36.6

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

49.7

-0

1.9

62.23

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000001129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040896

138043286 - 138056982

13697

ENSAPLT00000001456

138043286 - 138056982

13697