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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138070285_138071316_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138070285 - 138071316

Intron Length:

1032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCCTG

5'SS Class:

major

3'SS Sequence:

TCTTGTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

TCTCCTCTGACT

Flanking Amino Acid:

RSQLEQYLQKVTLDANITKS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.6

48.1

Major BPS

69.1

0.47

60.7

37.6

Major PPT

0.85

0.8

80.2

37.3

Minor 5ss

-1

3.1

48.4

47.2

Minor BPS

58.8

0.36

1.7

77.4

39.1

Associated Gene:

Gene:

SNX31

Ensembl Gene ID:

ENSAPLG00000024380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034951

138065178 - 138094185

29008