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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138071382_138078766_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138071382 - 138078766

Intron Length:

7385

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTACCTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TTCTACCTAACA

Flanking Amino Acid:

FINFFRKLQLATFKIQTQRA

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

85.7

25.5

Major BPS

70.8

0.52

70.6

31.6

Major PPT

75.1

0.56

0.9

34.9

Minor 5ss

40.8

-1

43.6

Minor BPS

0.4

1.9

77.31

39.3

Associated Gene:

Gene:

SNX31

Ensembl Gene ID:

ENSAPLG00000024380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034951

138065178 - 138094185

29008