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Intron Name: Anas_platyrhynchos_platyrhynchos_2_138088571_138089092_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

138088571 - 138089092

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

AATGTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

TTCTGTTCAATG

Flanking Amino Acid:

RLRSWQVTFLGEDDTLEFRF

Intron Amino Acid Position:

317

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.67

79.2

33.9

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

0.7

0.9

77.7

40.7

Minor 5ss

40.9

-1

2.8

58.9

39.3

Minor BPS

-0.2

58.73

Associated Gene:

Gene:

SNX31

Ensembl Gene ID:

ENSAPLG00000024380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034951

138065178 - 138094185

29008